BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017G02LP1|AL427200
(946 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig988 1787 0.0
>3x_Contig988
Length = 2280
Score = 1787 bits (900), Expect = 0.0
Identities = 929/934 (99%), Gaps = 4/934 (0%)
Strand = Plus / Plus
Query: 1 gaaccccgnagaccgcctcaattgacgatttggtcgatcatatcttctatattgcttctc 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 gaaccccg-agaccgcctcaattgacgatttggtcgatcatatcttctatattgcttctc 1008
Query: 61 ttatcggctgggagcatgtcggattcggtggtgattacgatggtatggagaaggctcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 ttatcggctgggagcatgtcggattcggtggtgattacgatggtatggagaaggctcctg 1068
Query: 121 tagggcttgaagatgtctccaagtaccctgatgttatctataagtgtatggaaagaggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1069 tagggcttgaagatgtctccaagtaccctgatgttatctataagtgtatggaaagaggtg 1128
Query: 181 catctgatgaagacgttagaggattaatgggtaataaccttttgcgagtatggaaatcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 catctgatgaagacgttagaggattaatgggtaataaccttttgcgagtatggaaatcag 1188
Query: 241 ttgagatcatatctgaaataatcaaaagcaagatgctaagaggtaggtgtatcgaagctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1189 ttgagatcatatctgaaataatcaaaagcaagatgctaagaggtaggtgtatcgaagctg 1248
Query: 301 aatgggaaggaagagaatgggagtwttttgaatgttttaaagacgtcaatgaagttttcc 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1249 aatgggaaggaagagaatgggagtattttgaatgttttaaagacgtcaatgaagttttcc 1308
Query: 361 aaggaagtaaagaactgtatttttcggcacataaatggcttccttccaatcattgaacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 aaggaagtaaagaactgtatttttcggcacataaatggcttccttccaatcattgaacaa 1368
Query: 421 tagaccataacacttgcctacagaaatttacctattccgtttaagggcggtatatctttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1369 tagaccataacacttgcctacagaaatttacctattccgtttaagggcggtatatctttt 1428
Query: 481 aatatgcaaagaaatacagtactacattatttactaattattaattacagcattcggcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1429 aatatgcaaagaaatacagtactacattatttactaattattaattacagcattcggcct 1488
Query: 541 tatgtgtagagtctttccacatgatttggacagagagttagttcttggttctttttctaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1489 tatgtgtagagtctttccacatgatttggacagagagttagttcttggttctttttctaa 1548
Query: 601 gtttagctgaggccctaatatactatataatcatgagctgggtccactaatgccgaataa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1549 gtttagctgaggccctaatatactatataatcatgagctgggtccactaatgccgaataa 1608
Query: 661 tcaccatatgataacgcctttgatatatgggctaatcgttcaagagaatttgaagcaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1609 tcaccatatgataacgcctttgatatatgggctaatcgttcaagagaatttgaagcaaca 1668
Query: 721 ttcatcccattggatacaaatgaatctagaactgatgtgaaatgagagtacaaatttttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1669 ttcatcccattggatacaaatgaatctagaactgatgtgaaatgagagtacaaatttttg 1728
Query: 781 tcctcgatcattaatgatccaattgcaccaaggtatattggccagtgacatgcgatacta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1729 tcctcgatcattaatgatccaattgcaccaaggtatattggccagtgacatgcgatacta 1788
Query: 841 catgtattttgaaaaggaattg-aaacaaacattctagcattttttccagtttggtcttg 899
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1789 catgtattttgaaaaggaattgaaaacaaacattctagcattttttccagtttggtcttg 1848
Query: 900 aga-caatcttatctaaaggc-ttcctaagaaaa 931
||| ||||||||||||||||| ||||||||||||
Sbjct: 1849 agaccaatcttatctaaaggctttcctaagaaaa 1882
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7237
Number of Sequences: 1807
Number of extensions: 7237
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 946
length of database: 10,358,551
effective HSP length: 16
effective length of query: 930
effective length of database: 10,329,639
effective search space: 9606564270
effective search space used: 9606564270
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)